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data visualization
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0
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12
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11k
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Deseq2 rlog or 'regular' normalization?
Deseq2
rlog transformation
data visualization
8.6 years ago
sunil.mangalam
• 0
4
votes
3
replies
716
views
RNA-Seq analysis with DESeq2: showing two conditions do *not* significantly differ
deseq2
RNA-Seq
uniform distribution
data visualization
updated 4.2 years ago by
Steve Lianoglou
★ 13k • written 4.2 years ago by
Ndimensional
▴ 20
0
votes
1
reply
1.9k
views
Pathview: visualization of data
pathview
data visualization
updated 8.2 years ago by
Luo Weijun
★ 1.6k • written 8.2 years ago by
Guido Hooiveld
★ 3.9k
1
vote
1
reply
2.0k
views
Using pathview with uncommon species leads to Errors
pathview
Kegg
rnaseq
data visualization
updated 7.8 years ago by
Luo Weijun
★ 1.6k • written 7.8 years ago by
rafre
• 0
0
votes
1
reply
2.5k
views
Input file of NGS data for Pathview
rnaseq
pathview
data visualization
updated 8.5 years ago by
Luo Weijun
★ 1.6k • written 8.5 years ago by
amoltej
▴ 10
0
votes
1
reply
621
views
DNA Deferential metheylation
data visualization
7.4 years ago
tarek_2050
• 0
0
votes
0
replies
828
views
Visualize FlowSet by Date
FlowSet
data visualization
cellcounts
6.9 years ago
Maria
• 0
1
vote
0
replies
1.1k
views
Job:
Summer Vacation Studentships in Data Science, MRC Cancer Unit, University of Cambridge, UK
data science
data visualization
machine learning
cancer
Job
6.1 years ago • updated 5.9 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
460
views
how to construct mds plot of differentially expressed genes?
differentially expressed genes
mds plot
data visualization
5.1 years ago
pratikshasharma47
• 0
0
votes
0
replies
1.6k
views
Job:
Multiple postdoctoral fellowships are available immediately in the Gehlenborg Lab in the Department of Biomedical Informatics at Harvard Medical Scho…
bioinformatics
bioinformatician job
data visualization
Job
8.6 years ago
Doe, Aimee
▴ 40
10 results • Page
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
• 0
I have performed RUVg correction and extracted W, factors of unwanted variation. According to limma guide, > In the limma approach to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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